11074 Bestrophin superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11074	chr_19a_19	Bestrophin superfamily	52062	53394	+	Bestrophin superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7442628	Thaps11074.2, Thaps11074.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0027

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0045	0.44

Most Highly Correlated Transcripts

4108 hypothetical protein 0.9405	9258 HP_PGM_like 0.8619	9012 hypothetical protein 0.8566	8384 hypothetical protein 0.849	11962 hypothetical protein 0.8475	12076 EPL1 superfamily 0.8433
269868 MviM 0.8343	11869 hypothetical protein 0.8328	263899 COG3899 0.8313	5833 hypothetical protein 0.8289

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Bestrophin superfamily		Bestrophin, RFP-TM, chloride channel; Bestrophin is a 68-kDa basolateral plasma membrane protein...	-	102.218	5.98E-25	132 - 369	superfamily	260991

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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