9258 HP_PGM_likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
9258	chr_12	HP_PGM_like	1035530	1036237	+	HP_PGM_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
7448033	Thaps9258.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0106

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0013	0.47	0.036 65

Most Highly Correlated Transcripts

21583 hypothetical protein 0.897	5588 hypothetical protein 0.8909	6192 hypothetical protein 0.8909	2240 hypothetical protein 0.8875	12076 EPL1 superfamily 0.8802	4551 hypothetical protein 0.8788
23952 hypothetical protein 0.8743	5671 hypothetical protein 0.874	261727 KR 0.8725	34476 DnaJ 0.8705

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HP_PGM_like		Histidine phosphatase domain found in phosphoglycerate mutases and related proteins, mostly...	cl11399	59.258	1.54E-11	85 - 169	specific	132718
HP superfamily		Histidine phosphatase domain found in a functionally diverse set of proteins, mostly phosphatases;...	-	59.258	1.54E-11	85 - 169	superfamily	264352

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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