11078 zf-C2HC5
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11078 chr_19a_19 zf-C2HC5 72339 73380 - zf-C2HC5

Synonyms

NCBI ID Ensembl Genomes exon ID
7442632 Thaps11078.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0356

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0034
 0.54

Most Highly Correlated Transcripts

2009

hypothetical protein
0.8793

bd815

(bd815) NA
0.8723

4525

hypothetical protein
0.8654

25738

ANK
0.8458

23170

hypothetical protein
0.844

10823

hypothetical protein
0.838

2732

Cyclophilin_PPIL3_like
0.8375

6534

DER1
0.8369

2310

hypothetical protein
0.8263

2047

hypothetical protein
0.8253

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
zf-C2HC5 superfamily Putative zinc finger motif, C2HC5-type; This zinc finger appears to be common in activating signal... - 62.7321 6.25E-13 231 - 268 superfamily 253624
zf-C2HC5 superfamily Putative zinc finger motif, C2HC5-type; This zinc finger appears to be common in activating signal... - 62.7321 6.25E-13 231 - 268 superfamily 253624

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46184 PHATRDRAFT_46184 261240 225415 Not available Not available AT3G47610.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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