261087 BioAThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261087	chr_1	BioA	2293284	2294489	-	BioA

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445505	Thaps261087.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0421

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0029	0.39

Most Highly Correlated Transcripts

2320 hypothetical protein 0.8903	bd833 (bd833) NA 0.8621	bd1959 (bd1959) NA 0.8416	22395 hypothetical protein 0.8303	bd1851 (bd1851) NA 0.8229	bd415 (bd415) arom_aa_hydroxylase superfamily 0.8225
bd1058 (bd1058) NA 0.821	32067 PTZ00182 0.8204	261615 SpoT 0.8199	24534 hypothetical protein 0.8178

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAT_I superfamily		Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent...	-	80.6905	6.48E-17	201 - 340	superfamily	267298
BioA		Adenosylmethionine-8-amino-7-oxononanoate aminotransferase [Coenzyme metabolism]	-	90.2985	4.43E-20	169 - 339	multi-dom	223239

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_44984	PHATRDRAFT_44984	Not available	259548	438290	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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