11097 Sulfotransfer_2 superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11097	chr_19a_19	Sulfotransfer_2 superfamily	128377	129535	-	Sulfotransfer_2 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449883	Thaps11097.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0363

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0068	0.42	0.55 0.59

Most Highly Correlated Transcripts

12899 AAA 0.8382	5778 hypothetical protein 0.817	3176 hypothetical protein 0.809	9636 hypothetical protein 0.8053	10753 hypothetical protein 0.8031	264018 hypothetical protein 0.8018
13448 Sec1 0.8013	262422 DEXDc 0.7979	11641 GluZincin superfamily 0.7901	9912 hypothetical protein 0.787

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Sulfotransfer_2 superfamily		Sulfotransferase family; This family includes a variety of sulfotransferase enzymes. Chondroitin 6-...	-	72.8237	4.54E-15	146 - 377	superfamily	267879

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments