261324 PLN02724Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261324	chr_2	PLN02724	768994	772327	-	PLN02724

Synonyms

NCBI ID	Ensembl Genomes exon ID
7450215	Thaps261324.9, Thaps261324.7, Thaps261324.1, Thaps261324.4, Thaps261324.6, Thaps261324.5, Thaps261324.2, Thaps261324.8, Thaps261324.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0326

Most Highly Correlated Transcripts

25270 hypothetical protein 0.9475	269997 COG1112 0.9393	25214 PRK02224 0.9331	10487 hypothetical protein 0.9317	28004 hypothetical protein 0.9279	37609 PKc_like superfamily 0.9224
33759 HECTc 0.9204	25142 SWIRM 0.9196	23469 Plus-3 0.9168	21839 Symplekin_C 0.9164

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AAT_I superfamily		Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent...	-	91.991	5.58E-20	127 - 587	superfamily	267298
MOSC_N superfamily		MOSC N-terminal beta barrel domain; This domain is found to the N-terminus of pfam03473. The...	-	70.0779	5.43E-14	616 - 736	superfamily	251986
PLN02724		Molybdenum cofactor sulfurase	-	451.63	1.14E-144	73 - 906	multi-dom	215384

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATR_46641	PHATR_46641	207845	218986	456573	Cre02.g142351.t1.1	AT1G16540.1	480999

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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