261407 NAD_binding_8 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261407 chr_2 NAD_binding_8 superfamily 1230742 1232300 - NAD_binding_8 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps261407.2, Thaps261407.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0017

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0203
 0.30

Most Highly Correlated Transcripts

270357

hypothetical protein
0.9759

3186

hypothetical protein
0.9194

4370

hypothetical protein
0.9154

10088

hypothetical protein
0.8994

10943

(DXR1) PLN02696
0.8922

40966

(Tp_sigma70.6) Sig70-cyanoRpoD
0.8893

10809

hypothetical protein
0.8824

270222

0.8776

ThpsCp022

(psaE) photosystem I subunit IV
0.8763

11086

hypothetical protein
0.876

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NAD_binding_8 superfamily NAD(P)-binding Rossmann-like domain; NAD(P)-binding Rossmann-like domain. - 298.936 1.63E-95 77 - 491 superfamily 267487
carotene-cycl lycopene cyclase family protein; This family includes lycopene beta and epsilion cyclases (which... - 238.485 4.68E-73 89 - 492 multi-dom 130850

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8835 PHATRDRAFT_8835 139968 181616 42521 Cre08.g358538.t1.1 AT3G10230.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0008152 GO:0016491 GO:0016117 GO:0016705 GO:0018585 GO:0018586 GO:0018587 GO:0018588 GO:0018589 GO:0018590 GO:0018591 GO:0018592 GO:0018593 GO:0018594 GO:0018595 GO:0018596 GO:0018597 GO:0018598 GO:0018599 GO:0018600 GO:0018601 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0016117

carotenoid biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of carotenoids, tetraterpenoid compounds in which two units of 4 isoprenoid residues joined head-to-tail are themselves joined tail-to-tail.
GO Category: 
BP

GO:0016705

oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen

Details: 
Catalysis of an oxidation-reduction (redox) reaction in which hydrogen or electrons are transferred from each of two donors, and molecular oxygen is reduced or incorporated into a donor.
GO Category: 
MF

GO:0018585

fluorene oxygenase activity

Details: 
Catalysis of the reaction: fluorene + 2 H+ + 2 e- + O2 = H2O + 9-fluorenol.
GO Category: 
MF

GO:0018586

mono-butyltin dioxygenase activity

Details: 
Catalysis of the reaction: butyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutyltin.
GO Category: 
MF

GO:0018587

NA

Details: 
NA
GO Category: 
NA

GO:0018588

tri-n-butyltin dioxygenase activity

Details: 
Catalysis of the reaction: tri-n-butyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutyldibutyltin.
GO Category: 
MF

GO:0018589

di-n-butyltin dioxygenase activity

Details: 
Catalysis of the reaction: dibutyltin + O2 + 2 H+ + 2 e- = H2O + beta-hydroxybutylbutyltin.
GO Category: 
MF

GO:0018590

methylsilanetriol hydroxylase activity

Details: 
Catalysis of the reaction: methylsilanetriol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylsilanetriol.
GO Category: 
MF

GO:0018591

methyl tertiary butyl ether 3-monooxygenase activity

Details: 
Catalysis of the reaction: methyl tert-butyl ether + 1/2 O2 = tert-butyl alcohol + formaldehyde.
GO Category: 
MF

GO:0018592

4-nitrocatechol 4-monooxygenase activity

Details: 
Catalysis of the reaction: 4-nitrocatechol + O2 + 4 e- + 3 H+ = H2O + nitrite + 1,2,4-benzenetriol.
GO Category: 
MF

GO:0018593

4-chlorophenoxyacetate monooxygenase activity

Details: 
Catalysis of the reaction: 4-chlorophenoxyacetate + 1/2 O2 = glyoxylate + 4-chlorophenol.
GO Category: 
MF

GO:0018594

tert-butanol 2-monooxygenase activity

Details: 
Catalysis of the reaction: tert-butanol + 1/2 O2 = 2-methyl-2-hydroxy-1-propanol.
GO Category: 
MF

GO:0018595

alpha-pinene monooxygenase activity

Details: 
Catalysis of the reaction: alpha-pinene + O2 + 2 H+ + 2 e- = H2O + pinocarveol.
GO Category: 
MF

GO:0018596

dimethylsilanediol hydroxylase activity

Details: 
Catalysis of the reaction: dimethylsilanediol + O2 + 2 H+ + 2 e- = H2O + hydroxymethylmethylsilanediol.
GO Category: 
MF

GO:0018597

ammonia monooxygenase activity

Details: 
Catalysis of the oxidation of alkanes (up to C8) to alcohols and alkenes (up to C5) to epoxides and alcohols in the presence of ammonium ions.
GO Category: 
MF

GO:0018598

hydroxymethylsilanetriol oxidase activity

Details: 
Catalysis of the reaction: hydroxymethylsilanetriol + O2 + 2 H+ + 2 e- = 2 H2O + formylsilanetriol.
GO Category: 
MF

GO:0018599

2-hydroxyisobutyrate 3-monooxygenase activity

Details: 
Catalysis of the reaction: 2-hydroxyisobutyrate + 1/2 O2 = 2,3-dihydroxy-2-methyl propionate.
GO Category: 
MF

GO:0018600

alpha-pinene dehydrogenase activity

Details: 
Catalysis of the reaction: alpha-pinene + O2 + 2 H+ + 2 e- = H2O + myrtenol.
GO Category: 
MF

GO:0018601

4-nitrophenol 2-monooxygenase activity

Details: 
Catalysis of the reaction: 4-nitrophenol + H(+) + NADH + O(2) = 4-nitrocatechol + H(2)O + NAD(+).
GO Category: 
MF

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