261734 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
261734 chr_3 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ 657968 661143 - 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_

Synonyms

NCBI ID Ensembl Genomes exon ID
7444078 Thaps261734.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0196

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.9379

23740

DUF72
0.9217

261400

NA
0.9137

6693

hypothetical protein
0.9048

23817

hypothetical protein
0.9031

260866

(ORC2) ORC2 superfamily
0.8997

8500

PRP38 superfamily
0.8989

16613

S_TKc
0.8965

3354

hypothetical protein
0.8964

9570

HECTc
0.8949

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members; This subgroup of... cl16912 264.903 1.41E-80 774 - 1052 specific 176217
MDR superfamily Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family; The... - 264.903 1.41E-80 774 - 1052 superfamily 266485
HAD superfamily haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase. - 65.4486 4.81E-12 87 - 310 superfamily 267490
Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and... - 104.771 3.85E-24 740 - 1051 multi-dom 223991

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_38005 PHATRDRAFT_38005 179445 181198 450599 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008270 GO:0016491 -

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

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