262104 PI-PLCc_GDPD_SF superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262104 chr_4 PI-PLCc_GDPD_SF superfamily 645864 646388 - PI-PLCc_GDPD_SF superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447489 Thaps262104.1, Thaps262104.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0261

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0031
 0.36

Most Highly Correlated Transcripts

263734

LRR_RI superfamily
0.9498

263191

PLN03076
0.9468

596

Adaptin_N
0.9449

262826

DUF3608 superfamily
0.9443

262171

CAP_ED
0.9421

4959

hypothetical protein
0.9398

33225

MYSc
0.9387

262527

pi 4-kinase
0.9369

27435

PAH
0.9339

37960

(MYO5) MYSc
0.9336

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PI-PLCc_GDPD_SF superfamily Catalytic domain of phosphoinositide-specific phospholipase C-like phosphodiesterases superfamily;... - 133.73 4.41E-39 3 - 158 superfamily 246675

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004629 GO:0007165 GO:0007242 GO:0004435 GO:0006629 -

GO:0004629

phospholipase C activity

Details: 
Catalysis of the reaction: a phospholipid + H2O = 1,2-diacylglycerol + a phosphatidate.
GO Category: 
MF

GO:0007165

signal transduction

Details: 
The cellular process in which a signal is conveyed to trigger a change in the activity or state of a cell. Signal transduction begins with reception of a signal (e.g. a ligand binding to a receptor or receptor activation by a stimulus such as light), or for signal transduction in the absence of ligand, signal-withdrawal or the activity of a constitutively active receptor. Signal transduction ends with regulation of a downstream cellular process, e.g. regulation of transcription or regulation of a metabolic process. Signal transduction covers signaling from receptors located on the surface of the cell and signaling via molecules located within the cell. For signaling between cells, signal transduction is restricted to events at and within the receiving cell.
GO Category: 
BP

GO:0007242

NA

Details: 
NA
GO Category: 
NA

GO:0004435

phosphatidylinositol phospholipase C activity

Details: 
Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol 4,5-bisphosphate + H(2)O = 1,2-diacylglycerol + 1D-myo-inositol 1,4,5-trisphosphate + H(+).
GO Category: 
MF

GO:0006629

lipid metabolic process

Details: 
The chemical reactions and pathways involving lipids, compounds soluble in an organic solvent but not, or sparingly, in an aqueous solvent. Includes fatty acids; neutral fats, other fatty-acid esters, and soaps; long-chain (fatty) alcohols and waxes; sphingoids and other long-chain bases; glycolipids, phospholipids and sphingolipids; and carotenes, polyprenols, sterols, terpenes and other isoprenoids.
GO Category: 
BP

Add comment

Log in to post comments