37960 (MYO5) MYSc
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
37960 chr_17 (MYO5) MYSc 6074 11230 - MYSc

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0091

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0014
 0.46

Most Highly Correlated Transcripts

262854

CBS_pair superfamily
0.9557

33225

MYSc
0.9443

bd843

(bd843) NA
0.9416

263859

GH18_chitinase-like superfamily
0.9396

263191

PLN03076
0.939

15537

KISc
0.9384

27435

PAH
0.9376

596

Adaptin_N
0.9369

262697

hypothetical protein
0.9339

262104

PI-PLCc_GDPD_SF superfamily
0.9336

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MYSc Myosin motor domain. This catalytic (head) domain has ATPase activity and belongs to the larger... cl00286 739.849 0 144 - 850 specific 238071
Motor_domain superfamily Myosin and Kinesin motor domain. These ATPases belong to the P-loop NTPase family and provide the... - 739.849 0 144 - 850 superfamily 260327

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23704 Not available Not available Not available 75288 Not available Not available 534588

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003774 GO:0005524 GO:0016459 GO:0004351 -

GO:0003774

motor activity

Details: 
Catalysis of movement along a polymeric molecule such as a microfilament or microtubule, coupled to the hydrolysis of a nucleoside triphosphate.
GO Category: 
MF

GO:0005524

ATP binding

Details: 
Interacting selectively and non-covalently with ATP, adenosine 5'-triphosphate, a universally important coenzyme and enzyme regulator.
GO Category: 
MF

GO:0016459

myosin complex

Details: 
A protein complex, formed of one or more myosin heavy chains plus associated light chains and other proteins, that functions as a molecular motor; uses the energy of ATP hydrolysis to move actin filaments or to move vesicles or other cargo on fixed actin filaments; has magnesium-ATPase activity and binds actin. Myosin classes are distinguished based on sequence features of the motor, or head, domain, but also have distinct tail regions that are believed to bind specific cargoes.
GO Category: 
CC

GO:0004351

glutamate decarboxylase activity

Details: 
Catalysis of the reaction: L-glutamate = 4-aminobutanoate + CO2.
GO Category: 
MF

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