262307 BCCT
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262307 chr_4 BCCT 2009314 2011094 + BCCT

Synonyms

NCBI ID Ensembl Genomes exon ID
7451357 Thaps262307.1, Thaps262307.4, Thaps262307.3, Thaps262307.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0010

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0148
 0.34

Most Highly Correlated Transcripts

9569

hypothetical protein
0.915

263979

PKc_like superfamily
0.902

261437

hypothetical protein
0.8977

37810

GMPK
0.8929

23188

(Tp_HSF_1.4b) HSF_DNA-bind
0.8868

260914

MFS
0.8864

596

Adaptin_N
0.886

264237

AdoMet_MTases superfamily
0.8838

22899

hypothetical protein
0.8801

bd1487

(bd1487) PLN02688
0.8734

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
BCCT BCCT family transporter; BCCT family transporter. cl00569 340.267 3.91E-111 82 - 463 specific 251048
BCCT superfamily BCCT family transporter; BCCT family transporter. - 340.267 3.91E-111 82 - 463 superfamily 260506

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48315 PHATRDRAFT_48315 185654 Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016020 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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