262320 tptThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
262320	chr_4	tpt	2108093	2109476	+	tpt

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452228	Thaps262320.1, Thaps262320.2, Thaps262320.5, Thaps262320.3, Thaps262320.4

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0123

Most Highly Correlated Transcripts

8130 hypothetical protein 0.8775	262632 Glyco_tranf_GTA_type superfamily 0.8667	8509 hypothetical protein 0.8662	10515 hypothetical protein 0.8611	5614 hypothetical protein 0.8543	7567 hypothetical protein 0.8539
18148 Rab 0.8526	5599 HVSL superfamily 0.8508	20292 DPM3 superfamily 0.8504	1101 hypothetical protein 0.8492

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
TPT superfamily		Triose-phosphate Transporter family; This family includes transporters with a specificity for...	-	76.8252	2.17E-17	167 - 322	superfamily	251760
TPT superfamily		Triose-phosphate Transporter family; This family includes transporters with a specificity for...	-	76.8252	2.17E-17	167 - 322	superfamily	251760
tpt		Tpt phosphate/phosphoenolpyruvate translocator; The 6-8 TMS Triose-phosphate Transporter (TPT)...	-	171.447	1.61E-50	7 - 325	multi-dom	129898

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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