262326 ran binding protein 4-like protein
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262326 chr_4 ran binding protein 4-like protein 2140621 2143952 - ran binding protein 4-like protein

Synonyms

NCBI ID Ensembl Genomes exon ID
7452234 Thaps262326.4, Thaps262326.1, Thaps262326.3, Thaps262326.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0220

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0272
 0.25

Most Highly Correlated Transcripts

bd1515

(bd1515) Adenylsuccinate_lyase_2
0.9286

27873

PLN02274
0.9033

bd1828

(bd1828) NA
0.9013

261462

hypothetical protein
0.8976

22204

hypothetical protein
0.8948

30301

PLN03206
0.8937

39022

COG2319
0.8936

bd1876

(bd1876) NatB_MDM20 superfamily
0.8915

268678

(Tp_Myb2R3) ZUO1
0.8898

23862

Syo1_like superfamily
0.8897

Conserved Domains

Not available

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_23582 PHATRDRAFT_23582 170952 262211 469192 Cre12.g490850.t1.1 AT4G27640.1 471015

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0000059 GO:0005634 GO:0005643 GO:0005737 GO:0008565 GO:0004429 GO:0015072 GO:0015073 GO:0016303 -

GO:0000059

protein import into nucleus, docking

Details: 
A protein complex assembly process that contributes to protein import into the nucleus, and that results in the association of a cargo protein, a carrier protein such as an importin alpha/beta heterodimer, and a nucleoporin located at the periphery of the nuclear pore complex.
GO Category: 
BP

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0005643

nuclear pore

Details: 
Any of the numerous similar discrete openings in the nuclear envelope of a eukaryotic cell, where the inner and outer nuclear membranes are joined.
GO Category: 
CC

GO:0005737

cytoplasm

Details: 
All of the contents of a cell excluding the plasma membrane and nucleus, but including other subcellular structures.
GO Category: 
CC

GO:0008565

protein transporter activity

Details: 
Enables the directed movement of proteins into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0004429

NA

Details: 
NA
GO Category: 
NA

GO:0015072

NA

Details: 
NA
GO Category: 
NA

GO:0015073

NA

Details: 
NA
GO Category: 
NA

GO:0016303

1-phosphatidylinositol-3-kinase activity

Details: 
Catalysis of the reaction: 1-phosphatidyl-1D-myo-inositol + ATP = a 1-phosphatidyl-1D-myo-inositol 3-phosphate + ADP + 2 H(+).
GO Category: 
MF

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