268678 (Tp_Myb2R3) ZUO1
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268678 chr_4 (Tp_Myb2R3) ZUO1 972451 974436 - ZUO1

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0272
 0.25

Most Highly Correlated Transcripts

27873

PLN02274
0.9499

268688

hypothetical protein
0.942

39022

COG2319
0.9311

bd1515

(bd1515) Adenylsuccinate_lyase_2
0.9273

268331

WD40
0.9238

36434

DUF1253
0.9238

bd1876

(bd1876) NatB_MDM20 superfamily
0.9235

268238

PRK05192
0.9208

21082

Cupin_8 superfamily
0.9119

23079

zf-LYAR
0.909

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... cl02542 63.3333 1.01E-12 11 - 65 specific 99751
DnaJ superfamily DnaJ domain or J-domain. DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play... - 63.3333 1.01E-12 11 - 65 superfamily 261333
ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis /... - 122.449 7.32E-31 4 - 198 multi-dom 227594

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_47726 PHATRDRAFT_47726 179456 181160 107450 Cre01.g003376.t1.1 AT3G11450.1 333312

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003677 GO:0005634 GO:0006457 GO:0031072 GO:0051082 -

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0031072

heat shock protein binding

Details: 
Interacting selectively and non-covalently with a heat shock protein, any protein synthesized or activated in response to heat shock.
GO Category: 
MF

GO:0051082

unfolded protein binding

Details: 
Interacting selectively and non-covalently with an unfolded protein.
GO Category: 
MF

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