262572 Octopine_DH
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
262572 chr_5 Octopine_DH 1492172 1493646 - Octopine_DH

Synonyms

NCBI ID Ensembl Genomes exon ID
7448148 Thaps262572.3, Thaps262572.2, Thaps262572.1, Thaps262572.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0028

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0287
 0.36

Most Highly Correlated Transcripts

bd1078

(bd1078) NA
0.9054

bd1820

(bd1820) Fasciclin
0.9019

bd624

(bd624) Glyco_transf_34 superfamily
0.8945

bd1893

(bd1893) NA
0.8945

bd1306

(bd1306) NA
0.8935

bd1765

(bd1765) NA
0.893

bd208

(bd208) DUF3529
0.886

bd1645

(bd1645) tpt
0.8826

5389

hypothetical protein
0.8823

40193

NA
0.8822

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Octopine_DH superfamily NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain; This group of enzymes act on the CH... - 133.13 6.82E-37 251 - 438 superfamily 251217
Octopine_DH superfamily NAD/NADP octopine/nopaline dehydrogenase, alpha-helical domain; This group of enzymes act on the CH... - 133.13 6.82E-37 251 - 438 superfamily 251217

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 245424 214128 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0016491 GO:0050662 -

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0050662

coenzyme binding

Details: 
Interacting selectively and non-covalently with a coenzyme, any of various nonprotein organic cofactors that are required, in addition to an enzyme and a substrate, for an enzymatic reaction to proceed.
GO Category: 
MF

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