11174 ENDO3c
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
11174 chr_19a_19 ENDO3c 347512 348772 + ENDO3c

Synonyms

NCBI ID Ensembl Genomes exon ID
7446304 Thaps11174.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0007

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0261
 0.35

Most Highly Correlated Transcripts

20405

GRX_GRXh_1_2_like
0.8961

11184

hypothetical protein
0.893

36641

Aldolase_Class_I superfamily
0.8883

36669

TPT
0.8861

3914

hypothetical protein
0.8794

26991

GRX_GRXh_1_2_like
0.8752

33353

TRX_family
0.8749

11183

hypothetical protein
0.864

2678

Rotamase
0.8551

22792

Rab1_Ypt1
0.8544

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
ENDO3c endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase... cl19066 65.7258 6.47E-13 289 - 407 specific 238013
ENDO3c superfamily endonuclease III; includes endonuclease III (DNA-(apurinic or apyrimidinic site) lyase), alkylbase... - 65.7258 6.47E-13 289 - 407 superfamily 267419

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
13023 PHATRDRAFT_43417 PHATRDRAFT_43417 255382 308378 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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