13023 APP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
13023 chr_11a APP 100068 102862 + APP

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0174

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0202
 0.30

Most Highly Correlated Transcripts

261400

NA
0.9043

4502

hypothetical protein
0.892

264177

P4Hc
0.8908

4192

hypothetical protein
0.8894

2107

hypothetical protein
0.8847

268228

2A0106
0.882

31829

CBS_like
0.8817

30701

PRK05279
0.8817

2317

Mito_carr
0.8791

25254

hypothetical protein
0.8777

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
APP X-Prolyl Aminopeptidase 2. E.C. 3.4.11.9. Also known as X-Pro aminopeptidase, proline... cl00279 351.479 1.43E-115 474 - 701 specific 238518
APP_MetAP superfamily A family including aminopeptidase P, aminopeptidase M, and prolidase. Also known as... - 351.479 1.43E-115 474 - 701 superfamily 260321
PepP Xaa-Pro aminopeptidase [Amino acid transport and metabolism] - 231.547 3.42E-68 333 - 699 multi-dom 223085

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_11174 PHATRDRAFT_11174 170979 319884 63427 Cre09.g408851.t1.1 AT3G05350.1 534742

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006508 GO:0008235 GO:0008451 -

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008235

metalloexopeptidase activity

Details: 
Catalysis of the hydrolysis of a peptide bond not more than three residues from the N- or C-terminus of a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0008451

NA

Details: 
NA
GO Category: 
NA

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