263046 HA
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263046 chr_7 HA 32500 34195 - HA

Synonyms

NCBI ID Ensembl Genomes exon ID
7446577 Not available

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0230

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0210
 0.31

Most Highly Correlated Transcripts

21659

hypothetical protein
0.911

5332

hypothetical protein
0.9024

268136

COG1054
0.8987

30862

PTZ00368
0.8947

20960

hypothetical protein
0.8938

37705

DUF4110
0.8932

21908

hypothetical protein
0.8881

22009

(Tp_CCHH21) regulator [Rayko]
0.8869

22690

RRM_Nop6
0.882

270004

hypothetical protein
0.8809

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 64.2489 3.42E-13 236 - 295 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 64.2489 3.42E-13 236 - 295 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 64.2489 3.42E-13 236 - 295 superfamily 251968
HA superfamily Helicase associated domain; This short domain is found in multiple copies in bacterial helicase... - 64.2489 3.42E-13 236 - 295 superfamily 251968

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available 74703 Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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