263266 PRK09372
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263266 chr_7 PRK09372 1633561 1634328 + PRK09372

Synonyms

NCBI ID Ensembl Genomes exon ID
7447166 Thaps263266.2, Thaps263266.1, Thaps263266.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0222

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0191
 0.44

Most Highly Correlated Transcripts

bd1877

(bd1877) NA
0.9437

bd1667

(bd1667) Mpp10
0.9125

bd1946

(bd1946) NA
0.8686

13308

PLN02948
0.8649

4372

hypothetical protein
0.8626

bd1875

(bd1875) NA
0.8618

bd738

(bd738) NA
0.8475

bd930

(bd930) HA
0.8462

bd1801

(bd1801) NA
0.8461

22965

SrmB
0.8324

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
PRK09372 ribonuclease activity regulator protein RraA; Provisional cl00480 236.958 7.80E-80 10 - 167 specific 236487
Methyltransf_6 superfamily Demethylmenaquinone methyltransferase; Members of this family are demethylmenaquinone... - 236.958 7.80E-80 10 - 167 superfamily 260452

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Cre13.g578150.t1.2 AT5G56260.1 Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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