263385 Aa_trans superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
263385 chr_8 Aa_trans superfamily 536243 538060 + Aa_trans superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445591 Thaps263385.2, Thaps263385.4, Thaps263385.1, Thaps263385.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0409

Most Highly Correlated Transcripts

1906

hypothetical protein
0.9126

16114

PLN02350
0.9094

4772

hypothetical protein
0.898

13448

Sec1
0.896

31126

Mito_carr
0.8888

2154

hypothetical protein
0.887

23379

hypothetical protein
0.8866

15417

AAA
0.8832

9124

hypothetical protein
0.8829

9861

DUF563
0.8819

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Aa_trans superfamily Transmembrane amino acid transporter protein; This transmembrane region is found in many amino acid... - 161.697 3.88E-44 15 - 365 superfamily 266708

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005279 GO:0006865 GO:0016020 -

GO:0005279

NA

Details: 
NA
GO Category: 
NA

GO:0006865

amino acid transport

Details: 
The directed movement of amino acids, organic acids containing one or more amino substituents, into, out of or within a cell, or between cells, by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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