263505 CHD
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
263505 chr_9 CHD 307991 309577 + CHD
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0378
Normalized Mean Residue
Thaps_bicluster_0042
0.43
(bd392) DEXDc
0.9344
(bd446) HrpA
0.9126
PRP38 superfamily
0.8999
hypothetical protein
0.8843
(bd1949) NA
0.8834
S_TKc
0.88
FBPase
0.8797
0.878
hypothetical protein
0.8743
hypothetical protein
0.8732
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
CHD cyclase homology domain; Catalytic domains of the mononucleotidyl cyclases (MNC's), also... cl11967 203.965 2.36E-63 221 - 392 specific 143636
Nucleotidyl_cyc_III superfamily Class III nucleotidyl cyclases; Class III nucleotidyl cyclases are the largest, most diverse group... - 203.965 2.36E-63 221 - 392 superfamily 264492
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 63.4211 2.05E-12 84 - 185 superfamily 238075
PAS superfamily PAS domain; PAS motifs appear in archaea, eubacteria and eukarya. Probably the most surprising... - 63.4211 2.05E-12 84 - 185 superfamily 238075
CYCc Adenylyl- / guanylyl cyclase, catalytic domain; Present in two copies in mammalian adenylyl... - 195.169 1.14E-59 185 - 375 multi-dom 214485
sensory_box PAS domain S-box; The PAS domain was previously described. This sensory box, or S-box domain... - 90.0338 9.35E-22 70 - 185 multi-dom 232884
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available 493224
KEGG description KEGG Pathway
Not available Not available
GO:0007242 GO:0009190 GO:0016849 GO:0004016 GO:0008294 -

NA

Details: 
NA
GO Category: 
NA

cyclic nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a cyclic nucleotide, a nucleotide in which the phosphate group is in diester linkage to two positions on the sugar residue.
GO Category: 
BP

phosphorus-oxygen lyase activity

Details: 
Catalysis of the cleavage of a phosphorus-oxygen bond by other means than by hydrolysis or oxidation, or conversely adding a group to a double bond.
GO Category: 
MF

adenylate cyclase activity

Details: 
Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate.
GO Category: 
MF

calcium- and calmodulin-responsive adenylate cyclase activity

Details: 
Catalysis of the reaction: ATP = 3',5'-cyclic AMP + diphosphate, stimulated by calcium-bound calmodulin.
GO Category: 
MF
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