263963 Adaptin_NThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
263963	chr_13	Adaptin_N	71355	74612	-	Adaptin_N

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452963	Thaps263963.1, Thaps263963.4, Thaps263963.3, Thaps263963.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0437

Most Highly Correlated Transcripts

264679 Syja_N 0.9415	12500 SNF2_N 0.9407	8518 hypothetical protein 0.9387	21655 hypothetical protein 0.9387	264937 hypothetical protein 0.9306	32217 MA3 0.9293
37638 HrpA 0.9278	269100 S_TKc 0.9276	21274 hypothetical protein 0.9273	264072 (HSF43) HSF_DNA-bind superfamily 0.927

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Adaptin_N		Adaptin N terminal region; This family consists of the N terminal region of various alpha, beta and...	-	273.329	1.75E-80	23 - 599	multi-dom	250737

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_54028	PHATRDRAFT_54028	156997	149491	Not available	Not available	AT1G48760.3	346958

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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