264144 MFS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264144 chr_14 MFS 340717 342888 - MFS

Synonyms

NCBI ID Ensembl Genomes exon ID
7450867 Thaps264144.4, Thaps264144.2, Thaps264144.3, Thaps264144.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0361

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0053
 0.56

Most Highly Correlated Transcripts

bd923

(bd923) NA
0.9217

21655

hypothetical protein
0.8536

261078

Na_H_Exchanger
0.8482

264937

hypothetical protein
0.8477

35381

hypothetical protein
0.8421

264866

S_TKc
0.841

263963

Adaptin_N
0.8353

8777

SPX
0.8345

10873

NA
0.8329

25308

hypothetical protein
0.8324

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 88.9101 1.45E-19 200 - 568 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 88.9101 1.45E-19 200 - 568 superfamily 119392
MFS_1 Major Facilitator Superfamily; Major Facilitator Superfamily. - 63.2076 4.63E-11 195 - 568 multi-dom 254360

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATR_46692 PHATR_46692 Not available 203400 Not available Not available AT1G76430.1 548365

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

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