26436 Dcp
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26436 chr_17 Dcp 320683 323358 + Dcp

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0205

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0130
 0.40

Most Highly Correlated Transcripts

31829

CBS_like
0.9259

268592

VDE superfamily
0.9226

bd789

(bd789) ABC_ATPase superfamily
0.917

bd1161

(bd1161) NA
0.9102

36669

TPT
0.8979

17214

PLN02512
0.8849

1788

hypothetical protein
0.8833

262510

Alg6_Alg8 superfamily
0.8815

bd634

(bd634) NA
0.8801

574

PRK05444
0.8799

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
M3A_DCP Peptidase family M3 dipeptidyl carboxypeptidase (DCP); Peptidase family M3 dipeptidyl... cl14813 796.275 0 88 - 767 specific 188995
GluZincin superfamily Peptidase Gluzincin family (thermolysin-like proteinases, TLPs) includes peptidases M1, M2, M3, M4... - 796.275 0 88 - 767 superfamily 265459
Dcp Zn-dependent oligopeptidases [Amino acid transport and metabolism] - 712.508 0 58 - 768 multi-dom 223416

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_8670 PHATRDRAFT_8670 169635 247325 451158 Cre13.g572900.t1.1 AT5G65620.1 358769

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004222 GO:0006508 GO:0008237 GO:0008270 GO:0008944 -

GO:0004222

metalloendopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008237

metallopeptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds by a mechanism in which water acts as a nucleophile, one or two metal ions hold the water molecule in place, and charged amino acid side chains are ligands for the metal ions.
GO Category: 
MF

GO:0008270

zinc ion binding

Details: 
Interacting selectively and non-covalently with zinc (Zn) ions.
GO Category: 
MF

GO:0008944

NA

Details: 
NA
GO Category: 
NA

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