264492 Peptidase_C1A
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264492 chr_18 Peptidase_C1A 174447 175869 - Peptidase_C1A

Synonyms

NCBI ID Ensembl Genomes exon ID
7450946 Thaps264492.3, Thaps264492.2, Thaps264492.1, Thaps264492.4

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0102

Most Highly Correlated Transcripts

270222

0.9621

38331

YIP1 superfamily
0.9342

27986

LMBR1 superfamily
0.9325

20285

COG0694
0.9316

16295

FBPase
0.9305

13448

Sec1
0.9292

1857

p23_NUDC_like
0.9252

26212

(COP2) COG5096
0.9238

261400

NA
0.9236

14924

Lung_7-TM_R superfamily
0.9228

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Peptidase_C1A Peptidase C1A subfamily (MEROPS database nomenclature); composed of cysteine peptidases (CPs)... cl00298 167.801 3.46E-49 221 - 421 specific 239068
Peptidase_C1 superfamily C1 Peptidase family (MEROPS database nomenclature), also referred to as the papain family; composed... - 167.801 3.46E-49 221 - 421 superfamily 260335

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available 152822 210496 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004197 GO:0006508 GO:0008234 -

GO:0004197

cysteine-type endopeptidase activity

Details: 
Catalysis of the hydrolysis of internal, alpha-peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

GO:0006508

proteolysis

Details: 
The hydrolysis of proteins into smaller polypeptides and/or amino acids by cleavage of their peptide bonds.
GO Category: 
BP

GO:0008234

cysteine-type peptidase activity

Details: 
Catalysis of the hydrolysis of peptide bonds in a polypeptide chain by a mechanism in which the sulfhydryl group of a cysteine residue at the active center acts as a nucleophile.
GO Category: 
MF

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