11267 Cyclin_NThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
11267	chr_19b_31	Cyclin_N	31727	32618	-	Cyclin_N

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444379	Thaps11267.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0494

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0167	0.37	0.00017 520

Most Highly Correlated Transcripts

bd1749 (bd1749) NA 0.878	268354 hypothetical protein 0.8136	bd1803 (bd1803) NA 0.7886	bd740 (bd740) NA 0.7844	bd1891 (bd1891) COG3899 0.7683	18775 MORN superfamily 0.7491
262151 Chitin_synth_2 0.7408	269826 cyclin, cyclin d, cell cycle control 0.7386	bd1844 (bd1844) NA 0.733	21390 PS_II_psbQ_bact superfamily 0.7219

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
Cyclin_N		Cyclin, N-terminal domain; Cyclins regulate cyclin dependent kinases (CDKs). Human cyclin-O is a...	cl00050	64.8721	2.58E-13	78 - 187	specific	249617
CYCLIN superfamily		Cyclin box fold. Protein binding domain functioning in cell-cycle and transcription control....	-	64.8721	2.58E-13	78 - 187	superfamily	260157

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0000074 -

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