264851 COG3899
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
264851 chr_22 COG3899 733792 736427 - COG3899

Synonyms

NCBI ID Ensembl Genomes exon ID
7448219 Thaps264851.2, Thaps264851.1, Thaps264851.4, Thaps264851.3

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0151

Most Highly Correlated Transcripts

31803

MYSc
0.8949

6768

DUF726 superfamily
0.8907

30400

COG0390
0.8907

8003

PIG-L
0.8904

11613

hypothetical protein
0.8871

12500

SNF2_N
0.8818

263051

ZntA
0.8813

3320

Abhydrolase_5
0.8804

5961

Nucleotid_trans superfamily
0.8782

264679

Syja_N
0.8764

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAA_16 AAA ATPase domain; This family of domains contain a P-loop motif that is characteristic of the AAA... cl18944 93.6813 5.86E-22 90 - 278 specific 257559
AAA superfamily The AAA+ (ATPases Associated with a wide variety of cellular Activities) superfamily represents an... - 93.6813 5.86E-22 90 - 278 superfamily 267297
COG3899 Predicted ATPase [General function prediction only] - 227.281 3.60E-63 91 - 795 multi-dom 226415

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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