26678 (TKT1) PLN02790
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
26678 chr_1 (TKT1) PLN02790 1406705 1409096 + PLN02790

Synonyms

NCBI ID Ensembl Genomes exon ID
7447630 Thaps26678.2, Thaps26678.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0221

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0190
 0.26

Most Highly Correlated Transcripts

31516

SIK1
0.9236

26492

PRK05385
0.9145

23336

SRP40_C superfamily
0.9059

2157

D123 superfamily
0.9057

bd1515

(bd1515) Adenylsuccinate_lyase_2
0.8932

22672

hypothetical protein
0.8844

22499

TrmA
0.8842

21397

Nop52 superfamily
0.8831

29018

NMD3
0.8819

5532

hypothetical protein
0.8816

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TPP_TK Thiamine pyrophosphate (TPP) family, Transketolase (TK) subfamily, TPP-binding module; TK catalyzes... cl01629 394.178 2.45E-132 31 - 305 specific 238970
TPP_enzymes superfamily Thiamine pyrophosphate (TPP) enzyme family, TPP-binding module; found in many key metabolic enzymes... - 394.178 2.45E-132 31 - 305 superfamily 261022
TPP_PYR_DXS_TK_like Pyrimidine (PYR) binding domain of 1-deoxy-D-xylulose-5-phosphate synthase (DXS), transketolase (TK... cl11410 151.826 9.40E-43 391 - 552 specific 132916
TPP_enzyme_PYR superfamily Pyrimidine (PYR) binding domain of thiamine pyrophosphate (TPP)-dependent enzymes; Thiamine... - 151.826 9.40E-43 391 - 552 superfamily 264357
PLN02790 transketolase - 1081.58 0 33 - 692 multi-dom 215424

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_29260 PHATRDRAFT_29260 206407 261143 423965 Cre02.g080200.t1.2 AT3G60750.1 259407

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0004802 -

GO:0004802

transketolase activity

Details: 
Catalysis of the reversible transfer of a 2-carbon ketol group (CH2OH-CO-) from a ketose phosphate donor to an aldose phosphate acceptor.
GO Category: 
MF

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