268080 NTF2_like superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268080 chr_1 NTF2_like superfamily 1998645 1999304 - NTF2_like superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7445308 Thaps268080.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0290

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0114
 0.48

Most Highly Correlated Transcripts

bd1221

(bd1221) recQ_fam
0.939

3635

hypothetical protein
0.9158

32704

PKc_like superfamily
0.9112

9771

hypothetical protein
0.9028

27435

PAH
0.8973

22666

hypothetical protein
0.8972

262527

pi 4-kinase
0.8969

596

Adaptin_N
0.8963

263734

LRR_RI superfamily
0.8955

25527

hypothetical protein
0.8947

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
NTF2_like superfamily Nuclear transport factor 2 (NTF2-like) superfamily. This family includes members of the NTF2 family... - 70.3893 5.43E-16 17 - 175 superfamily 263720

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46522 PHATRDRAFT_46522 251786 323498 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005622 GO:0005634 GO:0006606 GO:0008565 -

GO:0005622

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

GO:0005634

nucleus

Details: 
A membrane-bounded organelle of eukaryotic cells in which chromosomes are housed and replicated. In most cells, the nucleus contains all of the cell's chromosomes except the organellar chromosomes, and is the site of RNA synthesis and processing. In some species, or in specialized cell types, RNA metabolism or DNA replication may be absent.
GO Category: 
CC

GO:0006606

protein import into nucleus

Details: 
The directed movement of a protein from the cytoplasm to the nucleus.
GO Category: 
BP

GO:0008565

protein transporter activity

Details: 
Enables the directed movement of proteins into, out of or within a cell, or between cells.
GO Category: 
MF

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