268092 PRK06199 superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
268092	chr_1	PRK06199 superfamily	2128649	2130315	-	PRK06199 superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7447637	Thaps268092.2, Thaps268092.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0144

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0040	0.39	0.032 0.41

Most Highly Correlated Transcripts

37934 GRX_PICOT_like 0.895	22673 NA 0.8673	11960 hypothetical protein 0.8621	bd716 (bd716) MviM 0.8533	7980 Sulfotransfer_1 0.8517	8041 hypothetical protein 0.8463
18841 RRM_RBM8 0.8396	19977 TRX_family 0.8383	plastid_psb28 0.8353	261400 NA 0.8332

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
PRK06199 superfamily		ornithine cyclodeaminase; Validated	-	232.741	1.87E-73	21 - 345	superfamily	247954
PRK08291		ectoine utilization protein EutC; Validated	-	210.205	1.06E-64	8 - 346	multi-dom	236221

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_35643	PHATRDRAFT_35643	224163	251037	203679	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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