268987 Glyco_hydro_10 superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
268987 chr_6 Glyco_hydro_10 superfamily 240795 241561 + Glyco_hydro_10 superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7448387 Thaps268987.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0489

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0026
 0.39

Most Highly Correlated Transcripts

262692

0.9235

4108

hypothetical protein
0.8651

10873

NA
0.851

261058

UDP-g_GGTase superfamily
0.8187

263483

CHD
0.8178

9148

hypothetical protein
0.8161

261357

NAD_binding_8 superfamily
0.81

269666

MPN superfamily
0.8087

11371

hypothetical protein
0.8036

22359

hypothetical protein
0.7998

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Glyco_hydro_10 superfamily Glycosyl hydrolase family 10; Glycosyl hydrolase family 10. - 127.735 3.25E-37 1 - 104 superfamily 260961

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_44391 PHATRDRAFT_44391 211799 178733 108619 Not available Not available 519234

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0004553 GO:0005975 GO:0003677 GO:0006306 GO:0008170 -

GO:0004553

hydrolase activity, hydrolyzing O-glycosyl compounds

Details: 
Catalysis of the hydrolysis of any O-glycosyl bond.
GO Category: 
MF

GO:0005975

carbohydrate metabolic process

Details: 
The chemical reactions and pathways involving carbohydrates, any of a group of organic compounds based of the general formula Cx(H2O)y. Includes the formation of carbohydrate derivatives by the addition of a carbohydrate residue to another molecule.
GO Category: 
BP

GO:0003677

DNA binding

Details: 
Any molecular function by which a gene product interacts selectively and non-covalently with DNA (deoxyribonucleic acid).
GO Category: 
MF

GO:0006306

DNA methylation

Details: 
The covalent transfer of a methyl group to either N-6 of adenine or C-5 or N-4 of cytosine.
GO Category: 
BP

GO:0008170

N-methyltransferase activity

Details: 
Catalysis of the transfer of a methyl group to the nitrogen atom of an acceptor molecule.
GO Category: 
MF

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