261058 UDP-g_GGTase superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
261058	chr_1	UDP-g_GGTase superfamily	2091666	2095854	-	UDP-g_GGTase superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7449161	Not available

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0156

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0021	0.47	0.21 12000

Most Highly Correlated Transcripts

37336 Beach 0.9123	261357 NAD_binding_8 superfamily 0.9108	2587 O-FucT_like 0.9033	261056 (APB3) Adaptin_N 0.9026	8003 PIG-L 0.9026	264276 Vps8 superfamily 0.8927
261180 LRR_RI superfamily 0.8925	33287 (UBA2) Ube1 0.8916	9148 hypothetical protein 0.8884	14527 Sugar_tr 0.8875

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
UDP-g_GGTase superfamily		UDP-glucose:Glycoprotein Glucosyltransferase; The N-terminal region of this group of proteins is...	-	130.487	1.26E-33	1159 - 1347	superfamily	253723

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	452311	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

Add comment

Log in to post comments