269231 MFS
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
269231 chr_7 MFS 689128 691170 - MFS

Synonyms

NCBI ID Ensembl Genomes exon ID
7449195 Thaps269231.3, Thaps269231.1, Thaps269231.4, Thaps269231.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0332

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0093
 0.41

Most Highly Correlated Transcripts

6922

hypothetical protein
0.9164

262616

(MYB22)
0.9084

268194

(Tp_Myb4R1b) SANT
0.9042

1367

nuc_hydro superfamily
0.8917

12899

AAA
0.8907

3676

hypothetical protein
0.8835

41636

PolY_Pol_IV_kappa
0.8789

7261

hypothetical protein
0.8776

22688

hypothetical protein
0.8749

35798

AAA
0.8748

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 85.0581 3.12E-18 125 - 537 superfamily 119392
MFS superfamily The Major Facilitator Superfamily (MFS) is a large and diverse group of secondary transporters that... - 85.0581 3.12E-18 125 - 537 superfamily 119392

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_46251 PHATRDRAFT_46251 147390 Not available 239501 Cre07.g337850.t1.1 Not available 346609

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005215 GO:0006810 GO:0016021 GO:0016020 -

GO:0005215

transporter activity

Details: 
Enables the directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells.
GO Category: 
MF

GO:0006810

transport

Details: 
The directed movement of substances (such as macromolecules, small molecules, ions) into, out of or within a cell, or between cells, or within a multicellular organism by means of some agent such as a transporter or pore.
GO Category: 
BP

GO:0016021

integral component of membrane

Details: 
The component of a membrane consisting of gene products and protein complexes that have some part that penetrates at least one leaflet of the membrane bilayer. This component includes gene products that are buried in the bilayer with no exposure outside the bilayer.
GO Category: 
CC

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

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