269576 RimIThalassiosira pseudonana

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
269576	chr_11a	RimI	646080	646801	-	RimI

Synonyms

NCBI ID	Ensembl Genomes exon ID
7444481	Thaps269576.1, Thaps269576.2

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0139

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0054	0.44	0.00000000000079 0.044

Most Highly Correlated Transcripts

24373 hypothetical protein 0.8859	25375 hypothetical protein 0.8686	261808 HA 0.8675	37934 GRX_PICOT_like 0.8606	22307 TRAPP 0.8589	3426 zf-DNL superfamily 0.8578
9115 DnaJ 0.8502	bd1835 (bd1835) NA 0.8497	26991 GRX_GRXh_1_2_like 0.8453	8121 hypothetical protein 0.8451

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
RimI		Acetyltransferases [General function prediction only]	-	102.382	2.11E-27	1 - 153	multi-dom	223532

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_28723	PHATRDRAFT_28723	191829	215773	242746	Cre08.g383150.t1.2	AT1G03150.1	514762

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0008080 GO:0004147 GO:0004405 GO:0004406 GO:0008374 GO:0008415 GO:0008951 GO:0016406 GO:0016407 GO:0016408 GO:0016409 GO:0016410 GO:0016411 GO:0016412 GO:0016413 GO:0016414 GO:0016415 GO:0016416 GO:0016417 GO:0016418 GO:0016419 GO:0016420 GO:0016454 GO:0016747 GO:0016748 GO:0016749 GO:0016750 GO:0016751 GO:0016752 GO:0016753 GO:0018030 GO:0018031 GO:0018711 GO:0018712 GO:0018713 GO:0019105 GO:0019107 GO:0019186 GO:0019705 GO:0019706 GO:0019707 GO:0046941 -

GO:0008080

N-acetyltransferase activity

Details:

Catalysis of the transfer of an acetyl group to a nitrogen atom on the acceptor molecule.

GO Category:

GO:0004147

dihydrolipoamide branched chain acyltransferase activity

Details:

Catalysis of the reaction: acyl-CoA + dihydrolipoamide = CoA + S-acyldihydrolipoamide, where the acyl group is a branched chain.

GO Category:

GO:0004405

Details:

GO Category:

GO:0004406

Details:

GO Category:

GO:0008374

O-acyltransferase activity

Details:

Catalysis of the transfer of an acyl group to an oxygen atom on the acceptor molecule.

GO Category:

GO:0008415

Details:

GO Category:

GO:0008951

palmitoleoyl [acyl-carrier-protein]-dependent acyltransferase activity

Details:

Catalysis of the reaction: a palmitoleoyl-[acyl-carrier protein] + alpha-KDO-(2->4)-alpha-KDO-(2->6)-lipid IVA = KDO2-(palmitoleoyl)-lipid IVA + a holo-[acyl-carrier protein].

GO Category:

GO:0016406

carnitine O-acyltransferase activity

Details:

Catalysis of the transfer of an acyl group to an oxygen atom on the carnitine molecule.

GO Category:

GO:0016407

acetyltransferase activity

Details:

Catalysis of the transfer of an acetyl group to an acceptor molecule.

GO Category:

GO:0016408

C-acyltransferase activity

Details:

Catalysis of the transfer of an acyl group to a carbon atom on the acceptor molecule.

GO Category:

GO:0016409

palmitoyltransferase activity

Details:

Catalysis of the transfer of a palmitoyl (CH3-[CH2]14-CO-) group to an acceptor molecule.

GO Category:

GO:0016410

N-acyltransferase activity

Details:

Catalysis of the transfer of an acyl group to a nitrogen atom on the acceptor molecule.

GO Category:

GO:0016411

acylglycerol O-acyltransferase activity

Details:

Catalysis of the transfer of an acyl group to an oxygen atom on the acylglycerol molecule.

GO Category:

GO:0016412

serine O-acyltransferase activity

Details:

Catalysis of the transfer of an acyl group to an oxygen atom on the serine molecule.

GO Category:

GO:0016413

O-acetyltransferase activity

Details:

Catalysis of the transfer of an acetyl group to an oxygen atom on the acceptor molecule.

GO Category:

GO:0016414

O-octanoyltransferase activity

Details:

Catalysis of the transfer of an octanoyl group to an oxygen atom on the acceptor molecule.

GO Category:

GO:0016415

octanoyltransferase activity

Details:

Catalysis of the transfer of an octanoyl (CH3-[CH2]6-CO-) group to an acceptor molecule.

GO Category:

GO:0016416

O-palmitoyltransferase activity

Details:

Catalysis of the transfer of a palmitoyl group to an oxygen atom on the acceptor molecule.

GO Category:

GO:0016417

S-acyltransferase activity

Details:

Catalysis of the transfer of an acyl group to a sulfur atom on the acceptor molecule.

GO Category:

GO:0016418

S-acetyltransferase activity

Details:

Catalysis of the transfer of an acetyl group to a sulfur atom on the acceptor molecule.

GO Category:

GO:0016419

S-malonyltransferase activity

Details:

Catalysis of the transfer of a malonyl group to a sulfur atom on the acceptor molecule.

GO Category:

GO:0016420

malonyltransferase activity

Details:

Catalysis of the transfer of a malonyl (HOOC-CH2-CO-) group to an acceptor molecule.

GO Category:

GO:0016454

C-palmitoyltransferase activity

Details:

Catalysis of the transfer of a palmitoyl group to a carbon atom on the acceptor molecule.

GO Category:

GO:0016747

transferase activity, transferring acyl groups other than amino-acyl groups

Details:

Catalysis of the transfer of an acyl group, other than amino-acyl, from one compound (donor) to another (acceptor).

GO Category:

GO:0016748

succinyltransferase activity

Details:

Catalysis of the transfer of a succinyl (3-carboxypropanoyl) group to an acceptor molecule.

GO Category:

GO:0016749

N-succinyltransferase activity

Details:

Catalysis of the transfer of a succinyl group to a nitrogen atom on the acceptor molecule.

GO Category:

GO:0016750

O-succinyltransferase activity

Details:

Catalysis of the transfer of a succinyl group to an oxygen atom on the acceptor molecule.

GO Category:

GO:0016751

S-succinyltransferase activity

Details:

Catalysis of the transfer of a succinyl group to a sulfur atom on the acceptor molecule.

GO Category:

GO:0016752

sinapoyltransferase activity

Details:

Catalysis of the transfer of a sinapoyl group to an acceptor molecule.

GO Category:

GO:0016753

O-sinapoyltransferase activity

Details:

Catalysis of the transfer of a sinapoyl group to an oxygen atom on the acceptor molecule.

GO Category:

GO:0018030

peptidyl-lysine N6-myristoyltransferase activity

Details:

Catalysis of the transfer of a myristoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.

GO Category:

GO:0018031

peptidyl-lysine N6-palmitoyltransferase activity

Details:

Catalysis of the transfer of a palmitoyl group to the N6 nitrogen atom on a lysine residue of a peptide or protein molecule.

GO Category:

GO:0018711

benzoyl acetate-CoA thiolase activity

Details:

Catalysis of the reaction: benzoyl acetyl-CoA + CoA = acetyl-CoA + benzoyl-CoA.

GO Category:

GO:0018712

3-hydroxybutyryl-CoA thiolase activity

Details:

Catalysis of the reaction: 3-hydroxy-5-oxohexanoyl-CoA + CoASH = 3-hydroxybutyryl-CoA + acetyl-CoA.

GO Category:

GO:0018713

3-ketopimelyl-CoA thiolase activity

Details:

Catalysis of the reaction: 3-ketopimeloyl-CoA + CoA = glutaryl-CoA + acetyl-CoA.

GO Category:

GO:0019105

N-palmitoyltransferase activity

Details:

Catalysis of the transfer of a palmitoyl group to a nitrogen atom on the acceptor molecule.

GO Category:

GO:0019107

myristoyltransferase activity

Details:

Catalysis of the transfer of a myristoyl (CH3-[CH2]12-CO-) group to an acceptor molecule.

GO Category:

GO:0019186

acyl-CoA N-acyltransferase activity

Details:

Catalysis of the transfer of an acyl group from acyl-CoA to a nitrogen atom on an acceptor molecule.

GO Category:

GO:0019705

protein-cysteine S-myristoyltransferase activity

Details:

Catalysis of the transfer of a myristoyl group to a sulfur atom on a cysteine residue of a protein molecule.

GO Category:

GO:0019706

protein-cysteine S-palmitoyltransferase activity

Details:

Catalysis of the transfer of a palmitoyl group to a sulfur atom on the cysteine of a protein molecule.

GO Category:

GO:0019707

protein-cysteine S-acyltransferase activity

Details:

Catalysis of the transfer of an acyl group to a sulfur atom on the cysteine of a protein molecule.

GO Category:

GO:0046941

azetidine-2-carboxylic acid acetyltransferase activity

Details:

Catalysis of the reaction: L-azetidine-2-carboxylic acid + acetyl-CoA = CoA-SH + N-acetyl azetidine-2-carboxylic acid.

GO Category: