22307 TRAPP
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
22307 chr_4 TRAPP 1324731 1325473 + TRAPP

Synonyms

NCBI ID Ensembl Genomes exon ID
7448801 Thaps22307.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0137

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0181
 0.40

Most Highly Correlated Transcripts

26991

GRX_GRXh_1_2_like
0.9404

37934

GRX_PICOT_like
0.9292

23024

hypothetical protein
0.9242

41583

WD40
0.9222

23082

hypothetical protein
0.9188

8461

hypothetical protein
0.9158

9776

hypothetical protein
0.9153

4876

hypothetical protein
0.9108

42380

RRM_ist3_like
0.9105

26470

(GFS1) PLN02725
0.9066

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
TRAPP Transport protein particle (TRAPP) component; TRAPP plays a key role in the targeting and/or fusion... cl02135 149.643 1.82E-45 25 - 188 specific 252338
TRAPP superfamily Transport protein particle (TRAPP) component; TRAPP plays a key role in the targeting and/or fusion... - 149.643 1.82E-45 25 - 188 superfamily 261192

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_42274 PHATRDRAFT_42274 182493 320798 416786 Cre03.g145607.t1.1 AT5G54750.1 285951

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

Add comment

Log in to post comments