26991 GRX_GRXh_1_2_likeThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
26991	chr_2	GRX_GRXh_1_2_like	572711	573266	+	GRX_GRXh_1_2_like

Synonyms

NCBI ID	Ensembl Genomes exon ID
Not available	Thaps26991.2, Thaps26991.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0012

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0077	0.37	0.000000001 0.32

Most Highly Correlated Transcripts

2669 MmsB 0.9614	4876 hypothetical protein 0.9576	260762 hypothetical protein 0.9571	11214 SOUL 0.957	22171 hypothetical protein 0.9493	9776 hypothetical protein 0.9489
937 Methyltransf_21 superfamily 0.9425	263182 DUF1350 superfamily 0.9421	22307 TRAPP 0.9404	3914 hypothetical protein 0.9403

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
GRX_GRXh_1_2_like		Glutaredoxin (GRX) family, GRX human class 1 and 2 (h_1_2)-like subfamily; composed of proteins...	cl00388	140.753	4.56E-44	40 - 120	specific	239511
Thioredoxin_like superfamily		Protein Disulfide Oxidoreductases and Other Proteins with a Thioredoxin fold; The thioredoxin (TRX...	-	140.753	4.56E-44	40 - 120	superfamily	260398

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available	PHATRDRAFT_9883	PHATRDRAFT_9883	192656	203153	60433	Cre12.g550400.t1.2	AT5G20500.1	348647

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

GO:0005489 GO:0006118 GO:0045454 -

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