2845 Chloroa_b-bind superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2845 chr_2 Chloroa_b-bind superfamily 1998425 1999039 - Chloroa_b-bind superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
Not available Thaps2845.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0022

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0262
 0.15

Most Highly Correlated Transcripts

bd218

(bd218) Chloroa_b-bind superfamily
0.9937

270242

(PsbM) photosystem II reaction center M protein, plastid precursor
0.9855

bd1820

(bd1820) Fasciclin
0.9813

270210

(PsbO) oxygen-evolving enhancer protein 1 precursor
0.9798

24080

(Lhcr1) fucoxanthin chl a/c light-harvesting protein, lhcr type
0.9791

33018

(Lhcf6) PLN00120
0.9755

bd1160

(bd1160) Chloroa_b-bind superfamily
0.9726

31749

Chloroa_b-bind superfamily
0.9701

ThpsCt017

(trnG(ucc))
0.9651

34276

Chloroa_b-bind
0.9597

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Chloroa_b-bind superfamily Chlorophyll A-B binding protein; Chlorophyll A-B binding protein. - 159.908 8.23E-49 18 - 188 superfamily 261492

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
15791 Not available 273005 307174 Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0009765 GO:0016020 -

GO:0009765

photosynthesis, light harvesting

Details: 
Absorption and transfer of the energy absorbed from light photons between photosystem reaction centers.
GO Category: 
BP

GO:0016020

membrane

Details: 
Double layer of lipid molecules that encloses all cells, and, in eukaryotes, many organelles; may be a single or double lipid bilayer; also includes associated proteins.
GO Category: 
CC

Add comment

Log in to post comments