28521 (GDCH) GCS_H
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
28521 chr_6 (GDCH) GCS_H 477876 478710 - GCS_H

Synonyms

NCBI ID Ensembl Genomes exon ID
7451166 Thaps28521.1, Thaps28521.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0023

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0159
 0.26

Most Highly Correlated Transcripts

270222

0.9274

22396

hypothetical protein
0.9191

24700

hypothetical protein
0.9079

268343

NA
0.898

260953

COG2423
0.8832

5367

hypothetical protein
0.8792

36078

PRX5_like
0.8741

21821

hypothetical protein
0.863

36208

(GDCT) PLN02319
0.8584

3353

FMN_dh
0.8561

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GCS_H Glycine cleavage H-protein. Glycine cleavage H-proteins are part of the glycine cleavage system (... cl11404 137.28 1.40E-42 5 - 99 specific 133457
Biotinyl_lipoyl_domains superfamily Biotinyl_lipoyl_domains are present in biotin-dependent carboxylases/decarboxylases, the... - 137.28 1.40E-42 5 - 99 superfamily 264355

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_32847 PHATRDRAFT_32847 214509 313526 433753 Cre06.g253350.t1.2 AT2G35120.1 353634

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0005960 GO:0006546 GO:0004047 GO:0004374 -

GO:0005960

glycine cleavage complex

Details: 
A protein complex that catalyzes the reversible oxidation of glycine. In E. coli, it has four components: dihydrolipoamide dehydrogenase, glycine dehydrogenase (decarboxylating), lipoyl-GcvH-protein and aminomethyltransferase, also known as L, P, H, and T.
GO Category: 
CC

GO:0006546

glycine catabolic process

Details: 
The chemical reactions and pathways resulting in the breakdown of glycine, aminoethanoic acid.
GO Category: 
BP

GO:0004047

aminomethyltransferase activity

Details: 
Catalysis of the reaction: (6S)-tetrahydrofolate + S-aminomethyldihydrolipoylprotein = (6R)-5,10-methylenetetrahydrofolate + NH3 + dihydrolipoylprotein.
GO Category: 
MF

GO:0004374

NA

Details: 
NA
GO Category: 
NA

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