2885 LPLAT_AGPAT-like
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
2885 chr_2 LPLAT_AGPAT-like 2123371 2124506 + LPLAT_AGPAT-like

Synonyms

NCBI ID Ensembl Genomes exon ID
7450418 Thaps2885.2, Thaps2885.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0329

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0050
 0.45

Most Highly Correlated Transcripts

bd877

(bd877) NA
0.924

bd1875

(bd1875) NA
0.8907

264633

SERPIN
0.8874

bd1877

(bd1877) NA
0.8831

bd738

(bd738) NA
0.8781

bd690

(bd690) NA
0.8731

bd1801

(bd1801) NA
0.8722

bd1813

(bd1813) NA
0.864

bd409

(bd409) Snf7 superfamily
0.8639

bd933

(bd933) NA
0.8605

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
LPLAT_AGPAT-like Lysophospholipid Acyltransferases (LPLATs) of Glycerophospholipid Biosynthesis: AGPAT-like;... cl17185 102.349 5.97E-26 130 - 315 specific 153251
LPLAT superfamily Lysophospholipid acyltransferases (LPLATs) of glycerophospholipid biosynthesis; Lysophospholipid... - 102.349 5.97E-26 130 - 315 superfamily 266537

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0008152 GO:0008415 -

GO:0008152

metabolic process

Details: 
The chemical reactions and pathways, including anabolism and catabolism, by which living organisms transform chemical substances. Metabolic processes typically transform small molecules, but also include macromolecular processes such as DNA repair and replication, and protein synthesis and degradation.
GO Category: 
BP

GO:0008415

NA

Details: 
NA
GO Category: 
NA

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