30154 (Rpl27) KOW_RPL27
Thalassiosira pseudonana

Chromosome Product Transcript Start End Strand Short Name
30154 chr_15 (Rpl27) KOW_RPL27 610904 611396 + KOW_RPL27
NCBI ID Ensembl Genomes exon ID
7450265 Thaps30154.1
Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0047
Normalized Mean Residue
Thaps_bicluster_0227
0.33
(RS15A) PTZ00158
0.9352
PTZ00106
0.9334
(RL22) Ribosomal_L22e
0.9324
(RL36) Ribosomal_L36e
0.9253
(RL23a) PTZ00191
0.9192
hypothetical protein
0.9153
(RL14) Ribosomal_L14e
0.9138
Ubiquitin
0.9132
(RL26) KOW_RPL26
0.9008
(RL32) Ribosomal_L32_L32e
0.9005
Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
KOW_RPL27 KOW motif of eukaryotic Ribosomal Protein L27; RPL27e has a KOW motif at its N terminal. KOW domain... cl00354 129.226 3.48E-39 5 - 88 specific 240514
KOW superfamily KOW: an acronym for the authors' surnames (Kyrpides, Ouzounis and Woese); KOW domain is... - 129.226 3.48E-39 5 - 88 superfamily 260377
Ribosomal_L27e superfamily Ribosomal L27e protein family; The N-terminal region of the eukaryotic ribosomal L27 has the KOW... - 86.903 6.71E-23 51 - 145 superfamily 250856
Ribosomal_L27e superfamily Ribosomal L27e protein family; The N-terminal region of the eukaryotic ribosomal L27 has the KOW... - 86.903 6.71E-23 51 - 145 superfamily 250856
T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_17846 PHATRDRAFT_17846 273430 255369 433742 Cre17.g701650.t1.2 AT2G32220.1 353474
KEGG description KEGG Pathway
Ribosome map03010
GO:0003735 GO:0005622 GO:0005840 GO:0006412 -

structural constituent of ribosome

Details: 
The action of a molecule that contributes to the structural integrity of the ribosome.
GO Category: 
MF

intracellular

Details: 
The living contents of a cell; the matter contained within (but not including) the plasma membrane, usually taken to exclude large vacuoles and masses of secretory or ingested material. In eukaryotes it includes the nucleus and cytoplasm.
GO Category: 
CC

ribosome

Details: 
An intracellular organelle, about 200 A in diameter, consisting of RNA and protein. It is the site of protein biosynthesis resulting from translation of messenger RNA (mRNA). It consists of two subunits, one large and one small, each containing only protein and RNA. Both the ribosome and its subunits are characterized by their sedimentation coefficients, expressed in Svedberg units (symbol: S). Hence, the prokaryotic ribosome (70S) comprises a large (50S) subunit and a small (30S) subunit, while the eukaryotic ribosome (80S) comprises a large (60S) subunit and a small (40S) subunit. Two sites on the ribosomal large subunit are involved in translation, namely the aminoacyl site (A site) and peptidyl site (P site). Ribosomes from prokaryotes, eukaryotes, mitochondria, and chloroplasts have characteristically distinct ribosomal proteins.
GO Category: 
CC

translation

Details: 
The cellular metabolic process in which a protein is formed, using the sequence of a mature mRNA molecule to specify the sequence of amino acids in a polypeptide chain. Translation is mediated by the ribosome, and begins with the formation of a ternary complex between aminoacylated initiator methionine tRNA, GTP, and initiation factor 2, which subsequently associates with the small subunit of the ribosome and an mRNA. Translation ends with the release of a polypeptide chain from the ribosome.
GO Category: 
BP
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