31108 PLN02205
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31108 chr_1 PLN02205 1743142 1747337 + PLN02205

Synonyms

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0020

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0127
 0.38

Most Highly Correlated Transcripts

bd392

(bd392) DEXDc
0.9067

bd1949

(bd1949) NA
0.8993

bd446

(bd446) HrpA
0.8866

268592

VDE superfamily
0.886

268908

Trans_IPPS_HH
0.8726

262510

Alg6_Alg8 superfamily
0.8702

261400

NA
0.8702

16295

FBPase
0.8686

24970

hypothetical protein
0.8616

bd1777

(bd1777) NA
0.8594

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
GT1_TPS Trehalose-6-Phosphate Synthase (TPS) is a glycosyltransferase that catalyses the synthesis of alpha... cl10013 349.528 8.08E-108 432 - 914 specific 99963
Glycosyltransferase_GTB_type superfamily Glycosyltransferases catalyze the transfer of sugar moieties from activated donor molecules to... - 349.528 8.08E-108 432 - 914 superfamily 263942
HAD superfamily haloacid dehalogenase-like hydrolase; haloacid dehalogenase-like hydrolase. - 138.615 3.28E-36 971 - 1226 superfamily 267490
PLN02205 alpha,alpha-trehalose-phosphate synthase [UDP-forming] - 432.91 1.00E-133 427 - 1245 multi-dom 177855

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_15140 PHATRDRAFT_15140 184505 Not available Not available Not available Not available 350147

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0003825 GO:0005992 GO:0004805 -

GO:0003825

alpha,alpha-trehalose-phosphate synthase (UDP-forming) activity

Details: 
Catalysis of the reaction: UDP-glucose + D-glucose-6-phosphate = UDP + alpha,alpha-trehalose-6-phosphate.
GO Category: 
MF

GO:0005992

trehalose biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of trehalose, a disaccharide isomeric with sucrose and obtained from certain lichens and fungi.
GO Category: 
BP

GO:0004805

trehalose-phosphatase activity

Details: 
Catalysis of the reaction: trehalose 6-phosphate + H2O = trehalose + phosphate.
GO Category: 
MF

Add comment

Log in to post comments