31160 Sec3_C superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31160 chr_1 Sec3_C superfamily 170971 173304 + Sec3_C superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7451553 Thaps31160.2, Thaps31160.3, Thaps31160.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0103

Most Highly Correlated Transcripts

261400

NA
0.9303

264556

FBPase
0.9236

16295

FBPase
0.9224

24624

HSP70_NBD
0.921

262363

hypothetical protein
0.9139

268868

(ERCC2) rad3
0.9137

26212

(COP2) COG5096
0.9091

8500

PRP38 superfamily
0.9076

8489

GlcNAc superfamily
0.9065

6693

hypothetical protein
0.9063

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Sec3_C superfamily Exocyst complex component Sec3; This entry is the conserved middle and C-terminus of the Sec3... - 305.544 7.77E-95 92 - 584 superfamily 268303

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
23528 PHATRDRAFT_14850 PHATRDRAFT_14850 146769 321283 123290 Cre08.g367200.t1.1 AT1G71270.1 360503

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

Not available -

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