31166 AdoMet_dc superfamilyThalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
31166	chr_1	AdoMet_dc superfamily	2877014	2877905	-	AdoMet_dc superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452577	Thaps31166.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0463

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0068	0.42	0.55 0.59

Most Highly Correlated Transcripts

bd1890 (bd1890) NA 0.8788	32704 PKc_like superfamily 0.8759	30804 AdoMet_dc 0.8726	5801 hypothetical protein 0.8598	11244 (Tp_HSF_3.5f) HSF_DNA-bind superfamily 0.8529	22899 hypothetical protein 0.8444
261437 hypothetical protein 0.8413	22666 hypothetical protein 0.8349	267946 hypothetical protein 0.8344	269233 (Tp_HSF_3.4d) HSF_DNA-bind 0.8274

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
AdoMet_dc superfamily		S-adenosylmethionine decarboxylase; This family contains several S-adenosylmethionine decarboxylase...	-	71.3793	5.48E-16	225 - 288	superfamily	260572

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	Not available	Not available	Not available	Not available	Not available	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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