31317 (UGDH2) Ugd
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31317 chr_1 (UGDH2) Ugd 1351805 1353116 - Ugd

Synonyms

NCBI ID Ensembl Genomes exon ID
7451455 Thaps31317.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0141

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0180
 0.31

Most Highly Correlated Transcripts

4108

hypothetical protein
0.9517

23830

(GCD1) GCD
0.9031

26769

ERG4_ERG24 superfamily
0.8824

3661

MMCE
0.8803

32899

HlyIII superfamily
0.8769

21690

hypothetical protein
0.8766

263480

COG4770
0.8757

10064

DUF4476
0.8752

26991

GRX_GRXh_1_2_like
0.8747

264157

CBS_pair superfamily
0.8719

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
UDPG_MGDP_dh_N UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; The UDP-glucose/GDP-mannose... cl19126 184.744 7.85E-56 1 - 178 specific 252123
F420_oxidored superfamily NADP oxidoreductase coenzyme F420-dependent; NADP oxidoreductase coenzyme F420-dependent. - 184.744 7.85E-56 1 - 178 superfamily 267479
UDPG_MGDP_dh superfamily UDP-glucose/GDP-mannose dehydrogenase family, central domain; The UDP-glucose/GDP-mannose... - 137.763 2.58E-39 200 - 295 superfamily 250272
UDPG_MGDP_dh superfamily UDP-glucose/GDP-mannose dehydrogenase family, central domain; The UDP-glucose/GDP-mannose... - 137.763 2.58E-39 200 - 295 superfamily 250272
UDPG_MGDP_dh_C UDP binding domain; The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which... cl17747 127.237 1.50E-35 316 - 416 specific 214954
UDPG_MGDP_dh_C superfamily UDP-glucose/GDP-mannose dehydrogenase family, UDP binding domain; The UDP-glucose/GDP-mannose... - 127.237 1.50E-35 316 - 416 superfamily 266809
Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane] - 519.061 0 1 - 415 multi-dom 223936

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available Not available Not available Not available Not available Not available Not available Not available

KEGG

KEGG description KEGG Pathway
Not available Not available

GO Terms

GO:0006118 GO:0016491 GO:0015036 GO:0003979 -

GO:0006118

NA

Details: 
NA
GO Category: 
NA

GO:0016491

oxidoreductase activity

Details: 
Catalysis of an oxidation-reduction (redox) reaction, a reversible chemical reaction in which the oxidation state of an atom or atoms within a molecule is altered. One substrate acts as a hydrogen or electron donor and becomes oxidized, while the other acts as hydrogen or electron acceptor and becomes reduced.
GO Category: 
MF

GO:0015036

disulfide oxidoreductase activity

Details: 
Catalysis of the reaction: substrate with reduced sulfide groups = substrate with oxidized disulfide bonds.
GO Category: 
MF

GO:0003979

UDP-glucose 6-dehydrogenase activity

Details: 
Catalysis of the reaction: H(2)O + 2 NAD(+) + UDP-alpha-D-glucose = 3 H(+) + 2 NADH + UDP-alpha-D-glucuronate.
GO Category: 
MF

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