264157 CBS_pair superfamilyThalassiosira pseudonana | Diatom Portal

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Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
264157	chr_14	CBS_pair superfamily	448305	448958	-	CBS_pair superfamily

Synonyms

NCBI ID	Ensembl Genomes exon ID
7452668	Thaps264157.1, Thaps264157.2, Thaps264157.3

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0137

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0136	0.28	27 1100

Most Highly Correlated Transcripts

21690 hypothetical protein 0.9366	20405 GRX_GRXh_1_2_like 0.9319	1038 SPRYD7 0.923	3661 MMCE 0.9213	26991 GRX_GRXh_1_2_like 0.9133	21255 SYLF 0.9103
26769 ERG4_ERG24 superfamily 0.9054	34211 Cytochrom_C superfamily 0.9022	5600 Thioredoxin_like superfamily 0.899	263480 COG4770 0.898

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
CBS_pair superfamily		The CBS domain, named after human CBS, is a small domain originally identified in cystathionine...	-	89.1397	4.34E-23	52 - 174	superfamily	265675
COG0517		FOG: CBS domain [General function prediction only]	-	86.7565	4.68E-22	45 - 174	multi-dom	223591

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	168892	69814	Not available	Cre09.g405800.t1.2	AT4G34120.1	Not available

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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