31394 COG0436
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31394 chr_1 COG0436 314383 315885 + COG0436

Synonyms

NCBI ID Ensembl Genomes exon ID
7451537 Thaps31394.1, Thaps31394.3, Thaps31394.2

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0066

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0133
 0.40

Most Highly Correlated Transcripts

bd208

(bd208) DUF3529
0.9387

bd1380

(bd1380) ycf39
0.9268

bd1652

(bd1652) ABC_ATPase superfamily
0.9233

bd258

(bd258) HU
0.9005

bd1645

(bd1645) tpt
0.8986

bd1820

(bd1820) Fasciclin
0.8959

bd1306

(bd1306) NA
0.8942

bd1403

(bd1403) NA
0.8932

bd1154

(bd1154) tpt
0.8931

bd1160

(bd1160) Chloroa_b-bind superfamily
0.8909

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
AAT_like Aspartate aminotransferase family. This family belongs to pyridoxal phosphate (PLP)-dependent... cl18945 238.01 4.80E-74 64 - 429 specific 99734
AAT_I superfamily Aspartate aminotransferase (AAT) superfamily (fold type I) of pyridoxal phosphate (PLP)-dependent... - 238.01 4.80E-74 64 - 429 superfamily 267298
COG0436 Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism] - 267.989 4.55E-85 33 - 429 multi-dom 223513

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_22909 PHATRDRAFT_22909 273803 318330 456646 Cre17.g734200.t1.2 AT2G13810.1 Not available

KEGG

KEGG description KEGG Pathway
Biosynthesis of secondary metabolites map01110

GO Terms

GO:0003824 GO:0009058 GO:0016769 GO:0004069 -

GO:0003824

catalytic activity

Details: 
Catalysis of a biochemical reaction at physiological temperatures. In biologically catalyzed reactions, the reactants are known as substrates, and the catalysts are naturally occurring macromolecular substances known as enzymes. Enzymes possess specific binding sites for substrates, and are usually composed wholly or largely of protein, but RNA that has catalytic activity (ribozyme) is often also regarded as enzymatic.
GO Category: 
MF

GO:0009058

biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of substances; typically the energy-requiring part of metabolism in which simpler substances are transformed into more complex ones.
GO Category: 
BP

GO:0016769

transferase activity, transferring nitrogenous groups

Details: 
Catalysis of the transfer of a nitrogenous group from one compound (donor) to another (acceptor).
GO Category: 
MF

GO:0004069

L-aspartate:2-oxoglutarate aminotransferase activity

Details: 
Catalysis of the reaction: L-aspartate + 2-oxoglutarate = oxaloacetate + L-glutamate.
GO Category: 
MF

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