31438 HEAT_2Thalassiosira pseudonana | Diatom Portal

Genome Browser

Summary

	Chromosome	Product	Transcript Start	End	Strand	Short Name
31438	chr_1	HEAT_2	2603554	2604783	+	HEAT_2

Synonyms

NCBI ID	Ensembl Genomes exon ID
7445086	Thaps31438.1

Hierarchical Clustering

Expression Profile	Conditional Changes	Cluster Dendrogram	Discovered Potential cis-Regulatory Motifs
Thaps_hclust_0228

Motif-Guided Biclusters

	Normalized Mean Residue	Discovered Potential cis-Regulatory Motifs
Thaps_bicluster_0165	0.36	0.0014 0.015

Most Highly Correlated Transcripts

19158 GRX_PICOT_like 0.9099	bd1667 (bd1667) Mpp10 0.9024	268443 SAICAR_synt_Sc 0.9007	30454 Brix 0.89	bd1875 (bd1875) NA 0.8879	4372 hypothetical protein 0.885
36321 hypothetical protein 0.8802	21491 hypothetical protein 0.8795	34413 RRM_ABT1_like 0.8769	37374 PseudoU_synth superfamily 0.8756

Conserved Domains

Name	CD Accession	Definition	Superfamily	Bitscore	E-Value	From - To	Hit Type	PSSM ID
HEAT_2		HEAT repeats; This family includes multiple HEAT repeats.	-	60.0474	1.98E-11	265 - 355	multi-dom	257956
HEAT_2		HEAT repeats; This family includes multiple HEAT repeats.	-	60.0474	1.98E-11	265 - 355	multi-dom	257956

Homologs in Other Species

T. pseudonana	P. tricornutum	P. tricornutum DiatomCyc	F. cylindrus	Pseudo-nitzschia multiseries	E. huxleyi	C. reinhardtii	A. thaliana	P. sojae
Not available		Not available	165827	Not available	76411	Cre10.g435550.t1.2	AT3G58180.1	514765

KEGG

KEGG description	KEGG Pathway
Not available	Not available

GO Terms

Not available -

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