31598 cyclophilin superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31598 chr_1 cyclophilin superfamily 2082230 2083062 + cyclophilin superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7447596 Thaps31598.2, Thaps31598.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0175

Most Highly Correlated Transcripts

32782

MPN superfamily
0.932

16295

FBPase
0.9296

32226

CLPTM1 superfamily
0.9247

3693

SWIB
0.9241

36964

PLN02716
0.9197

13448

Sec1
0.9178

268257

fabG
0.9168

21271

hypothetical protein
0.9161

1906

hypothetical protein
0.9159

1857

p23_NUDC_like
0.9146

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
cyclophilin superfamily cyclophilin: cyclophilin-type peptidylprolyl cis- trans isomerases. This family contains eukaryotic... - 252.834 8.65E-85 52 - 239 superfamily 260252

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_9070 PHATRDRAFT_9070 186096 179232 Not available Cre12.g533800.t1.2 Not available 487921

KEGG

KEGG description KEGG Pathway
Spliceosome map03040

GO Terms

GO:0006457 GO:0003755 GO:0004600 GO:0030051 GO:0042027 -

GO:0006457

protein folding

Details: 
The process of assisting in the covalent and noncovalent assembly of single chain polypeptides or multisubunit complexes into the correct tertiary structure.
GO Category: 
BP

GO:0003755

peptidyl-prolyl cis-trans isomerase activity

Details: 
Catalysis of the reaction: peptidyl-proline (omega=180) = peptidyl-proline (omega=0).
GO Category: 
MF

GO:0004600

NA

Details: 
NA
GO Category: 
NA

GO:0030051

NA

Details: 
NA
GO Category: 
NA

GO:0042027

NA

Details: 
NA
GO Category: 
NA

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