36964 PLN02716
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
36964 chr_12 PLN02716 794418 795356 + PLN02716

Synonyms

NCBI ID Ensembl Genomes exon ID
7447996 Thaps36964.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0208

Most Highly Correlated Transcripts

38331

YIP1 superfamily
0.9221

261400

NA
0.9217

16295

FBPase
0.9215

7564

DUF547
0.9198

31598

cyclophilin superfamily
0.9197

4466

DNA_repr_REX1B
0.9188

22497

hypothetical protein
0.918

30701

PRK05279
0.917

4722

hypothetical protein
0.9149

18462

EMP24_GP25L
0.9141

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
QPRTase Quinolinate phosphoribosyl transferase (QAPRTase or QPRTase), also called nicotinate-nucleotide... cl17275 291.302 1.79E-97 32 - 309 specific 238806
PRTase_typeII superfamily Phosphoribosyltransferase (PRTase) type II; This family contains two enzymes that play an important... - 291.302 1.79E-97 32 - 309 superfamily 266604
PLN02716 nicotinate-nucleotide diphosphorylase (carboxylating) - 387.151 1.47E-134 30 - 312 multi-dom 178318

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_16599 PHATRDRAFT_16599 180590 300950 99818 Cre02.g141200.t1.2 AT2G01350.2 535380

KEGG

KEGG description KEGG Pathway
Metabolic pathways map01100

GO Terms

GO:0004514 GO:0009435 GO:0019363 -

GO:0004514

nicotinate-nucleotide diphosphorylase (carboxylating) activity

Details: 
Catalysis of the reaction: CO(2) + diphosphate + nicotinate D-ribonucleotide = 5-phospho-alpha-D-ribose 1-diphosphate + 2 H(+) + quinolinate.
GO Category: 
MF

GO:0009435

NAD biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of nicotinamide adenine dinucleotide, a coenzyme present in most living cells and derived from the B vitamin nicotinic acid; biosynthesis may be of either the oxidized form, NAD, or the reduced form, NADH.
GO Category: 
BP

GO:0019363

pyridine nucleotide biosynthetic process

Details: 
The chemical reactions and pathways resulting in the formation of a pyridine nucleotide, a nucleotide characterized by a pyridine derivative as a nitrogen base.
GO Category: 
BP

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