31762 (CAT2) Carn_acyltransf superfamily
Thalassiosira pseudonana

Genome Browser

Summary

Chromosome Product Transcript Start End Strand Short Name
31762 chr_2 (CAT2) Carn_acyltransf superfamily 407472 409653 + Carn_acyltransf superfamily

Synonyms

NCBI ID Ensembl Genomes exon ID
7442239 Thaps31762.2, Thaps31762.1

Hierarchical Clustering

Expression Profile Conditional Changes Cluster Dendrogram
Thaps_hclust_0388

Motif-Guided Biclusters

Normalized Mean Residue
Thaps_bicluster_0115
 0.37

Most Highly Correlated Transcripts

270222

0.913

bd176

(bd176) PP2Cc
0.8032

bd1150

(bd1150) PLN02433
0.7679

36631

UDPGlcNAc_PPase
0.7502

bd1821

(bd1821) NA
0.7477

bd1844

(bd1844) NA
0.7314

21983

hypothetical protein
0.7296

bd793

(bd793) NA
0.729

22304

hypothetical protein
0.7257

9552

hypothetical protein
0.7247

Conserved Domains

Name CD Accession Definition Superfamily Bitscore E-Value From - To Hit Type PSSM ID
Carn_acyltransf superfamily Choline/Carnitine o-acyltransferase; Choline/Carnitine o-acyltransferase. - 454.449 3.07E-151 75 - 671 superfamily 250110

Homologs in Other Species

T. pseudonana P. tricornutum P. tricornutum DiatomCyc F. cylindrus Pseudo-nitzschia multiseries E. huxleyi C. reinhardtii A. thaliana P. sojae
Not available PHATRDRAFT_48078 PHATRDRAFT_48078 179105 244595 Not available Not available Not available 557588

KEGG

KEGG description KEGG Pathway
Peroxisome map04146

GO Terms

GO:0008415 GO:0004092 -

GO:0008415

NA

Details: 
NA
GO Category: 
NA

GO:0004092

carnitine O-acetyltransferase activity

Details: 
Catalysis of the reaction: acetyl-CoA + carnitine = (R)-O-acetylcarnitine + CoA.
GO Category: 
MF

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